Journal: Nature Communications

Article Title: The spatial transcriptomic landscape of non-small cell lung cancer brain metastasis

doi: 10.1038/s41467-022-33365-y

Figure Lengend Snippet: a ROI-specific deconvolution of cell populations based on the corresponding bulk RNA-Seq data by SpatialDecon. Related ROIs are grouped together and identified on the x axis. b Deconvolution of cell populations by Qlucore Omics Explorer based on average gene expression in the indicated groups. c Cell deconvolution of the TME by MCP-Counter. d Violin plots showing the differences in the indicated cell types between the TIME-L, TIME-B, and TBME. The P values were based on nonparametric test (Kruskal–Wallis) followed by the Dunn test for pairwise comparisons. The dashed and solid lines within the plots indicate upper and lower quartiles and medians, respectively, n = 19, 15, and 8 samples in TBME, TIME-L, and TIME-B, respectively. Heatmaps colored from blue to red according to Z-score scale −2 to 2. Source data are provided as a Source Data file.

Article Snippet: Survival curves were fitted using the Kaplan–Meier formula in Qlucore Omics Explorer software, and a P value of <0.05 was considered significant by performing a log-rank test.

Techniques: RNA Sequencing Assay, Expressing

Journal: HardwareX

Article Title: MULA, an affordable framework for multifunctional liquid automation in natural- and life sciences with a focus on hardware design, setup, modularity and validation

doi: 10.1016/j.ohx.2024.e00581

Figure Lengend Snippet:

Article Snippet: MULA_Marlin firmware , Software package , CC BY NC 3.0 , Mendeley Data repository.

Techniques: Software